6SGB

mt-SSU assemblosome of Trypanosoma brucei

This is a non-PDB format compatible entry.
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Functional Information from GO Data

ChainGOidnamespacecontents
FD0005739cellular_componentmitochondrion
DJ0005737cellular_componentcytoplasm
DJ0005763cellular_componentmitochondrial small ribosomal subunit
DV0005763cellular_componentmitochondrial small ribosomal subunit
Ci0005763cellular_componentmitochondrial small ribosomal subunit
Cn0020023cellular_componentkinetoplast
Cn0005739cellular_componentmitochondrion
Fc0005759cellular_componentmitochondrial matrix
Fc0005747cellular_componentmitochondrial respiratory chain complex I
Fc0005739cellular_componentmitochondrion
Fc0000035molecular_functionacyl binding
Fc0000036molecular_functionacyl carrier activity
Fc0006633biological_processfatty acid biosynthetic process
DZ0005763cellular_componentmitochondrial small ribosomal subunit
Cj0005763cellular_componentmitochondrial small ribosomal subunit
CN0005763cellular_componentmitochondrial small ribosomal subunit
FK0005759cellular_componentmitochondrial matrix
FK0005739cellular_componentmitochondrion
FK0097177molecular_functionmitochondrial ribosome binding
FK0003729molecular_functionmRNA binding
FK0008494molecular_functiontranslation activator activity
FK0070131biological_processpositive regulation of mitochondrial translation
Cg0097014cellular_componentciliary plasm
Cg0005737cellular_componentcytoplasm
Cg0005763cellular_componentmitochondrial small ribosomal subunit
Cg0031981cellular_componentnuclear lumen
Cg0003735molecular_functionstructural constituent of ribosome
DT0005763cellular_componentmitochondrial small ribosomal subunit
DY0020023cellular_componentkinetoplast
DY0005763cellular_componentmitochondrial small ribosomal subunit
DY0005739cellular_componentmitochondrion
FX0005737cellular_componentcytoplasm
FX0005829cellular_componentcytosol
FX0020023cellular_componentkinetoplast
FX0005739cellular_componentmitochondrion
Fd0020023cellular_componentkinetoplast
Fd0005739cellular_componentmitochondrion
CI0005763cellular_componentmitochondrial small ribosomal subunit
CI0003735molecular_functionstructural constituent of ribosome
CI0006412biological_processtranslation
F70005763cellular_componentmitochondrial small ribosomal subunit
FF0008168molecular_functionmethyltransferase activity
FF0071424molecular_functionrRNA (cytosine-N4-)-methyltransferase activity
FF0070475biological_processrRNA base methylation
F10005763cellular_componentmitochondrial small ribosomal subunit
F10008168molecular_functionmethyltransferase activity
F10003735molecular_functionstructural constituent of ribosome
F10032259biological_processmethylation
F10006412biological_processtranslation
FQ0097014cellular_componentciliary plasm
FQ0005737cellular_componentcytoplasm
FQ0016020cellular_componentmembrane
FQ0005739cellular_componentmitochondrion
FQ0008076cellular_componentvoltage-gated potassium channel complex
FQ0015272molecular_functionATP-activated inward rectifier potassium channel activity
FQ0005249molecular_functionvoltage-gated potassium channel activity
FQ0006813biological_processpotassium ion transport
FQ0051260biological_processprotein homooligomerization
FR0097014cellular_componentciliary plasm
FR0005737cellular_componentcytoplasm
FR0016020cellular_componentmembrane
FR0005739cellular_componentmitochondrion
FR0008076cellular_componentvoltage-gated potassium channel complex
FR0015272molecular_functionATP-activated inward rectifier potassium channel activity
FR0005249molecular_functionvoltage-gated potassium channel activity
FR0006813biological_processpotassium ion transport
FR0051260biological_processprotein homooligomerization
FS0097014cellular_componentciliary plasm
FS0005737cellular_componentcytoplasm
FS0016020cellular_componentmembrane
FS0005739cellular_componentmitochondrion
FS0008076cellular_componentvoltage-gated potassium channel complex
FS0015272molecular_functionATP-activated inward rectifier potassium channel activity
FS0005249molecular_functionvoltage-gated potassium channel activity
FS0006813biological_processpotassium ion transport
FS0051260biological_processprotein homooligomerization
FT0097014cellular_componentciliary plasm
FT0005737cellular_componentcytoplasm
FT0016020cellular_componentmembrane
FT0005739cellular_componentmitochondrion
FT0008076cellular_componentvoltage-gated potassium channel complex
FT0015272molecular_functionATP-activated inward rectifier potassium channel activity
FT0005249molecular_functionvoltage-gated potassium channel activity
FT0006813biological_processpotassium ion transport
FT0051260biological_processprotein homooligomerization
FU0097014cellular_componentciliary plasm
FU0005737cellular_componentcytoplasm
FU0016020cellular_componentmembrane
FU0005739cellular_componentmitochondrion
FU0008076cellular_componentvoltage-gated potassium channel complex
FU0015272molecular_functionATP-activated inward rectifier potassium channel activity
FU0005249molecular_functionvoltage-gated potassium channel activity
FU0006813biological_processpotassium ion transport
FU0051260biological_processprotein homooligomerization
FO0005737cellular_componentcytoplasm
FO0005763cellular_componentmitochondrial small ribosomal subunit
CF0005763cellular_componentmitochondrial small ribosomal subunit
F60005739cellular_componentmitochondrion
FW0005739cellular_componentmitochondrion
FA0020023cellular_componentkinetoplast
FA0005739cellular_componentmitochondrion
Cp0005763cellular_componentmitochondrial small ribosomal subunit
Cp0005739cellular_componentmitochondrion
CK0005763cellular_componentmitochondrial small ribosomal subunit
CK0003735molecular_functionstructural constituent of ribosome
CK0006412biological_processtranslation
DO0005763cellular_componentmitochondrial small ribosomal subunit
DO0044145biological_processmodulation of development of symbiont involved in interaction with host
Cd0005763cellular_componentmitochondrial small ribosomal subunit
CO0005763cellular_componentmitochondrial small ribosomal subunit
CP0005737cellular_componentcytoplasm
CP0005763cellular_componentmitochondrial small ribosomal subunit
Ck0005737cellular_componentcytoplasm
Ck0031019cellular_componentmitochondrial mRNA editing complex
Ck0003723molecular_functionRNA binding
Ck0000963biological_processmitochondrial RNA processing
Ck0048255biological_processmRNA stabilization
Ck0043631biological_processRNA polyadenylation
Fe0005737cellular_componentcytoplasm
DE0020023cellular_componentkinetoplast
DE0031019cellular_componentmitochondrial mRNA editing complex
DE0005739cellular_componentmitochondrion
DE0003723molecular_functionRNA binding
DE0000963biological_processmitochondrial RNA processing
DE0048255biological_processmRNA stabilization
DE0043631biological_processRNA polyadenylation
Ca0005763cellular_componentmitochondrial small ribosomal subunit
Ca0005739cellular_componentmitochondrion
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Functional Information from PDB Data

site_idNumber of ResiduesDetails
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Functional Information from PDB atom coordinates for the "HETATM" binding sites

site_idNumber of ResiduesDetails
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Functional Information from PROSITE/UniProt

site_idNumber of ResiduesDetails
PS0059910Aminotransferases class-II pyridoxal-phosphate attachment site.T-[LIVMFYW]-[STAG]-K-[SAG]-[LIVMFYWR]-[SAG]-{ENKR}-{TNDR}-[SAG].
ChainResidueDetails
FATHR51-ALA60

PS003077Legume lectins beta-chain signature.[LIV]-[STAG]-V-[DEQV]-[FLI]-D-[ST].
ChainResidueDetails
DBLEU797-SER803

PS0001216Phosphopantetheine attachment site.[DEQGSTALMKRH]-[LIVMFYSTAC]-[GNQ]-[LIVMFYAG]-[DNEKHS]-S-[LIVMST]-{PCFY}-[STAGCPQLIVMF]-[LIVMATN]-[DENQGTAKRHLM]-[LIVMWSTA]-[LIVGSTACR]-{LPIY}-{VY}-[LIVMFA].
ChainResidueDetails
FcASP100-ILE115

PS0032712Bacterial rhodopsins retinal binding site.[FYIV]-{ND}-[FYVG]-[LIVM]-D-[LIVMF]-x-[STA]-K-x-{K}-[FY].
ChainResidueDetails
F1ILE86-TYR97

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Functional Information from SwissProt/UniProt

site_idNumber of ResiduesDetails
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Catalytic Information from CSA

site_idNumber of ResiduesDetails
171916
PDB entries from 2020-12-02