Author results

1J4G
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CRYSTAL STRUCTURE ANALYSIS OF THE TRICHOSANTHIN DELTA C7
Descriptor:Trichosanthin delta C7, CALCIUM ION
Authors:Ding, Y., Too, H.M., Wang, Z.L., Liu, Y.W., Dong, Y.C., Shaw, P.C., Rao, Z.H.
Deposit date:2001-09-30
Release date:2001-10-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:crystal structure analysis of the trichosanthin delta C7
To be Published
1MI8
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2.0 ANGSTROM CRYSTAL STRUCTURE OF A DNAB INTEIN FROM SYNECHOCYSTIS SP. PCC 6803
Descriptor:DnaB intein
Authors:Ding, Y., Chen, X., Ferrandon, S., Xu, M., Rao, Z.
Deposit date:2002-08-22
Release date:2003-08-19
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of mini-intein reveals a conserved catalytic module involved in side chain cyclization of asparagine during protein splicing
J.Biol.Chem., 278, 2003
1UCT
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CRYSTAL STRUCTURE OF THE EXTRACELLULAR FRAGMENT OF FC ALPHA RECEPTOR I (CD89)
Descriptor:Immunoglobulin alpha Fc receptor
Authors:Ding, Y., Xu, G., Yang, M., Zhang, W., Rao, Z.
Deposit date:2003-04-21
Release date:2003-07-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the Ectodomain of Human Fc{alpha}RI.
J.Biol.Chem., 278, 2003
6IR1
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CRYSTAL STRUCTURE OF RED FLUORESCENT PROTEIN MCHERRY COMPLEXED WITH THE NANOBODY LAM4 AT 1.9 ANGSTRON RESOLUTION
Descriptor:MCherry fluorescent protein, mCherry's nanobody LaM4
Authors:Ding, Y., Wang, Z.Y., Hu, R.T., Chen, X.
Deposit date:2018-11-09
Release date:2019-11-13
Method:X-RAY DIFFRACTION (1.919 Å)
Cite:Crystal structure of red fluorescent protein mCherry complexed with the nanobody LaM4 at 1.9 Angstron resolution
To Be Published
6IR2
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CRYSTAL STRUCTURE OF RED FLUORESCENT PROTEIN MCHERRY COMPLEXED WITH THE NANOBODY LAM2 AT 1.4 ANGSTRON RESOLUTION
Descriptor:MCherry fluorescent protein, mCherry's nanobody LaM2
Authors:Ding, Y., Wang, Z.Y., Hu, R.T., Chen, X.
Deposit date:2018-11-09
Release date:2019-11-13
Method:X-RAY DIFFRACTION (1.393 Å)
Cite:Crystal structure of red fluorescent protein mCherry complexed with the nanobody LaM2 at 1.4 Angstron resolution
To Be Published
5ZBZ
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CRYSTAL STRUCTURE OF THE DEAD DOMAIN OF HUMAN EIF4A WITH SANGUINARINE
Descriptor:Eukaryotic initiation factor 4A-I, 13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridin-13-ium, MALONATE ION
Authors:Ding, Y., Ding, L.
Deposit date:2018-02-14
Release date:2019-02-20
Last modified:2019-10-30
Method:X-RAY DIFFRACTION (1.308603 Å)
Cite:Targeting the N Terminus of eIF4AI for Inhibition of Its Catalytic Recycling.
Cell Chem Biol, 26, 2019
6ITP
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CRYSTAL STRUCTURE OF CORTISOL COMPLEXED WITH ITS NANOBODY AT PH 3.5
Descriptor:anti-cortisol camelid antibody, (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione
Authors:Ding, Y., Ding, L.L., Wang, Z.Y., Zhong, P.Y.
Deposit date:2018-11-24
Release date:2019-07-24
Method:X-RAY DIFFRACTION (1.572 Å)
Cite:Structural insights into the mechanism of single domain VHH antibody binding to cortisol.
Febs Lett., 593, 2019
6ITQ
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CRYSTAL STRUCTURE OF CORTISOL COMPLEXED WITH ITS NANOBODY AT PH 10.5
Descriptor:anti-cortisol camelid antibody, (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione, SULFATE ION
Authors:Ding, Y., Ding, L.L., Wang, Z.Y., Zhong, P.Y.
Deposit date:2018-11-24
Release date:2019-07-24
Method:X-RAY DIFFRACTION (1.526 Å)
Cite:Structural insights into the mechanism of single domain VHH antibody binding to cortisol.
Febs Lett., 593, 2019
1GHD
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CRYSTAL STRUCTURE OF THE GLUTARYL-7-AMINOCEPHALOSPORANIC ACID ACYLASE BY MAD PHASING
Descriptor:GLUTARYL-7-AMINOCEPHALOSPORANIC ACID ACYLASE
Authors:Ding, Y., Jiang, W., Mao, X., He, H., Zhang, S., Tang, H., Bartlam, M., Ye, S., Jiang, F., Liu, Y., Zhao, G., Rao, Z.
Deposit date:2000-12-07
Release date:2003-07-08
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Affinity alkylation of the Trp-B4 residue of the beta -subunit of the glutaryl 7-aminocephalosporanic acid acylase of Pseudomonas sp. 130.
J.Biol.Chem., 277, 2002
6J04
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CRYSTAL STRUCTURE OF FULL LENGTH HUMAN LC3B DELTA G120 MUTANT (2_125)
Descriptor:Microtubule-associated proteins 1A/1B light chain 3B, SULFATE ION
Authors:Ding, Y., Lu, B.X., Wang, Z.Y.
Deposit date:2018-12-21
Release date:2019-11-06
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Allele-selective lowering of mutant HTT protein by HTT-LC3 linker compounds
Nature, 575, 2019
4Z3D
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HUMAN CARBONYL REDUCTASE 1 WITH GLUTATHIONE IN A PROTECTIVE CONFIGURATION
Descriptor:Carbonyl reductase [NADPH] 1, GLUTATHIONE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ding, Y., Liang, Q.
Deposit date:2015-03-31
Release date:2015-10-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights on the catalytic site protection of human carbonyl reductase 1 by glutathione.
J.Struct.Biol., 192, 2015
1C76
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STAPHYLOKINASE (SAK) MONOMER
Descriptor:STAPHYLOKINASE
Authors:Rao, Z., Jiang, F., Liu, Y., Zhang, X., Chen, Y., Bartlam, M., Song, H., Ding, Y.
Deposit date:2000-02-01
Release date:2000-08-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Staphylokinase Dimer Offers New Clue to Reduction of Immunogenicity
To be published
1C77
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STAPHYLOKINASE (SAK) DIMER
Descriptor:STAPHYLOKINASE
Authors:Rao, Z., Jiang, F., Liu, Y., Zhang, X., Chen, Y., Bartlam, M., Song, H., Ding, Y.
Deposit date:2000-02-01
Release date:2000-08-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a staphylokinase: variant a model for reduced antigenicity.
Eur.J.Biochem., 269, 2002
1C78
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STAPHYLOKINASE (SAK) DIMER
Descriptor:STAPHYLOKINASE
Authors:Rao, Z., Jiang, F., Liu, Y., Zhang, X., Chen, Y., Bartlam, M., Song, H., Ding, Y.
Deposit date:2000-02-01
Release date:2000-08-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a staphylokinase: variant a model for reduced antigenicity.
Eur.J.Biochem., 269, 2002
1C79
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STAPHYLOKINASE (SAK) DIMER
Descriptor:STAPHYLOKINASE
Authors:Rao, Z., Jiang, F., Liu, Y., Zhang, X., Chen, Y., Bartlam, M., Song, H., Ding, Y.
Deposit date:2000-02-01
Release date:2000-08-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a staphylokinase: variant a model for reduced antigenicity.
Eur.J.Biochem., 269, 2002
1GHE
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CRYSTAL STRUCTURE OF TABTOXIN RESISTANCE PROTEIN COMPLEXED WITH AN ACYL COENZYME A
Descriptor:ACETYLTRANSFERASE, ACETYL COENZYME *A
Authors:He, H., Ding, Y., Bartlam, M., Sun, F., Le, Y., Qin, X., Tang, H., Zhang, R., Joachimiak, A., Liu, Y., Zhao, N., Rao, Z.
Deposit date:2000-12-13
Release date:2003-01-14
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of Tabtoxin Resistance Protein Complexed with Acetyl Coenzyme A Reveals the Mechanism for beta-Lactam Acetylation
J.Mol.Biol., 325, 2003
2N2L
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NMR STRUCTURE OF YERSINIA PESTIS AIL (ATTACHMENT INVASION LOCUS) IN DECYLPHOSPHOCHOLINE MICELLES CALCULATED WITH IMPLICIT MEMBRANE SOLVATION
Descriptor:Outer membrane protein X
Authors:Marassi, F.M., Ding, Y., Tian, Y., Schwieters, C.D., Yao, Y.
Deposit date:2015-05-10
Release date:2015-07-22
Last modified:2015-10-07
Method:SOLUTION NMR
Cite:Backbone structure of Yersinia pestis Ail determined in micelles by NMR-restrained simulated annealing with implicit membrane solvation.
J.Biomol.Nmr, 63, 2015
1J4J
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CRYSTAL STRUCTURE OF TABTOXIN RESISTANCE PROTEIN (FORM II) COMPLEXED WITH AN ACYL COENZYME A
Descriptor:TABTOXIN RESISTANCE PROTEIN, ACETYL COENZYME *A
Authors:He, H., Ding, Y., Bartlam, M., Zhang, R., Duke, N., Joachimiak, A., Shao, Y., Cao, Z., Tang, H., Liu, Y., Jiang, F., Liu, J., Zhao, N., Rao, Z.
Deposit date:2001-10-02
Release date:2003-06-03
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of tabtoxin resistance protein complexed with acetyl coenzyme A reveals the mechanism for beta-lactam acetylation.
J.Mol.Biol., 325, 2003
1QZ2
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CRYSTAL STRUCTURE OF FKBP52 C-TERMINAL DOMAIN COMPLEX WITH THE C-TERMINAL PEPTIDE MEEVD OF HSP90
Descriptor:FK506-binding protein 4, 5-mer peptide from Heat shock protein HSP 90
Authors:Wu, B., Li, P., Lou, Z., Liu, Y., Ding, Y., Shu, C., Shen, B., Rao, Z.
Deposit date:2003-09-15
Release date:2004-06-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:3D structure of human FK506-binding protein 52: Implications for the assembly of the glucocorticoid receptor/Hsp90/immunophilin heterocomplex.
Proc.Natl.Acad.Sci.USA, 101, 2004
1UJ1
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CRYSTAL STRUCTURE OF SARS CORONAVIRUS MAIN PROTEINASE (3CLPRO)
Descriptor:3C-like proteinase
Authors:Yang, H., Yang, M., Liu, Y., Bartlam, M., Ding, Y., Lou, Z., Sun, L., Zhou, Z., Ye, S., Anand, K., Pang, H., Gao, G.F., Hilgenfeld, R., Rao, Z.
Deposit date:2003-07-25
Release date:2003-11-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structures of severe acute respiratory syndrome virus main protease and its complex with an inhibitor
Proc.Natl.Acad.Sci.USA, 100, 2003
1UK2
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CRYSTAL STRUCTURE OF SARS CORONAVIRUS MAIN PROTEINASE (3CLPRO) AT PH8.0
Descriptor:3C-LIKE PROTEINASE
Authors:Yang, H., Yang, M., Liu, Y., Bartlam, M., Ding, Y., Lou, Z., Sun, L., Zhou, Z., Ye, S., Anand, K., Pang, H., Gao, G.F., Hilgenfeld, R., Rao, Z.
Deposit date:2003-08-14
Release date:2003-11-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structures of severe acute respiratory syndrome virus main protease and its complex with an inhibitor
Proc.Natl.Acad.Sci.USA, 100, 2003
1UK3
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CRYSTAL STRUCTURE OF SARS CORONAVIRUS MAIN PROTEINASE (3CLPRO) AT PH7.6
Descriptor:3C-like proteinase
Authors:Yang, H., Yang, M., Liu, Y., Bartlam, M., Ding, Y., Lou, Z., Sun, L., Zhou, Z., Ye, S., Anand, K., Pang, H., Gao, G.F., Hilgenfeld, R., Rao, Z.
Deposit date:2003-08-14
Release date:2003-11-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structures of severe acute respiratory syndrome virus main protease and its complex with an inhibitor
Proc.Natl.Acad.Sci.USA, 100, 2003
1UK4
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CRYSTAL STRUCTURE OF SARS CORONAVIRUS MAIN PROTEINASE (3CLPRO) COMPLEXED WITH AN INHIBITOR
Descriptor:3C-like proteinase, 5-mer peptide of inhibitor, CHLOROACETONE
Authors:Yang, H., Yang, M., Liu, Y., Bartlam, M., Ding, Y., Lou, Z., Sun, L., Zhou, Z., Ye, S., Anand, K., Pang, H., Gao, G.F., Hilgenfeld, R., Rao, Z.
Deposit date:2003-08-14
Release date:2003-11-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structures of severe acute respiratory syndrome virus main protease and its complex with an inhibitor
Proc.Natl.Acad.Sci.USA, 100, 2003
2N2M
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NMR STRUCTURE OF YERSINIA PESTIS AIL (ATTACHMENT INVASION LOCUS) IN DECYLPHOSPHOCHOLINE MICELLES
Descriptor:Outer membrane protein X
Authors:Marassi, F.M., Ding, Y., Yao, Y.
Deposit date:2015-05-10
Release date:2015-07-22
Last modified:2015-10-07
Method:SOLUTION NMR
Cite:Backbone structure of Yersinia pestis Ail determined in micelles by NMR-restrained simulated annealing with implicit membrane solvation.
J.Biomol.Nmr, 63, 2015
5YFP
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CRYO-EM STRUCTURE OF THE EXOCYST COMPLEX
Descriptor:Exocyst complex component SEC3, Exocyst complex component SEC5, Exocyst complex component SEC6, ...
Authors:Mei, K., Li, Y., Wang, S., Shao, G., Wang, J., Ding, Y., Luo, G., Yue, P., Liu, J.J., Wang, X., Dong, M.Q., Guo, W., Wang, H.W.
Deposit date:2017-09-21
Release date:2018-01-31
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Cryo-EM structure of the exocyst complex
Nat. Struct. Mol. Biol., 25, 2018